MANOR

DOI: 10.18129/B9.bioc.MANOR    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This is the development version of MANOR; for the stable release version, see MANOR.

CGH Micro-Array NORmalization

Bioconductor version: Development (3.11)

Importation, normalization, visualization, and quality control functions to correct identified sources of variability in array-CGH experiments.

Author: Pierre Neuvial <pierre.neuvial at genopole.cnrs.fr>, Philippe Hupe <philippe.hupe at curie.fr>

Maintainer: Pierre Neuvial <pierre.neuvial at genopole.cnrs.fr>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("MANOR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	CopyNumberVariation, DataImport, Microarray, Preprocessing, QualityControl, Software, TwoChannel
Version	1.59.1
In Bioconductor since	BioC 1.7 (R-2.2) (14.5 years)
License	GPL-2
Depends	R (>= 2.10), GLAD
Imports	GLAD, graphics, grDevices, stats, utils
LinkingTo
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SystemRequirements
Enhances
URL	http://bioinfo.curie.fr/projects/manor/index.html
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/MANOR
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/MANOR
Package Short Url	https://bioconductor.org/packages/MANOR/
Package Downloads Report	Download Stats