HCAExplorer

DOI: 10.18129/B9.bioc.HCAExplorer    

This is the development version of HCAExplorer; for the stable release version, see HCAExplorer.

Browse the Human Cell Atlas data portal

Bioconductor version: Development (3.11)

Search, browse, reference, and download resources from the Human Cell Atlas data portal. Development of this package is supported through funds from the Chan / Zuckerberg initiative.

Author: Daniel Van Twisk [aut], Martin Morgan [aut], Bioconductor Package Maintainer [cre]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("HCAExplorer")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("HCAExplorer")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("HCAExplorer")

 

HTML R Script HCAExplorer
PDF   Reference Manual

Details

biocViews DataImport, Sequencing, Software
Version 1.1.0
In Bioconductor since BioC 3.10 (R-3.6) (< 6 months)
License Artistic-2.0
Depends R (>= 3.6.0), dplyr
Imports S4Vectors, vctrs, curl, httr, jsonlite, methods, plyr, rlang, tibble, tidygraph, utils
LinkingTo
Suggests BiocStyle, knitr, rmarkdown, testthat (>= 2.1.0)
SystemRequirements
Enhances
URL https://github.com/Bioconductor/HCABrowser
BugReports https://github.com/Bioconductor/HCABrowser/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package HCAExplorer_1.1.0.tar.gz
Windows Binary HCAExplorer_1.1.0.zip
Mac OS X 10.11 (El Capitan) HCAExplorer_1.1.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/HCAExplorer
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/HCAExplorer
Package Short Url https://bioconductor.org/packages/HCAExplorer/
Package Downloads Report Download Stats

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